The handbook to do this is a PDF document by Pennfuture. Protects the best quality streams from point source discharges, like STP's, quarry discharges, detention basisns, etc...
http://www.pennfuture.org/UserFiles/PDFs/PennFutureStreamHndbkClr.pdf
http://www.pennfuture.org/UserFiles/PDFs/PennFutureStreamHndbkClr.pdf